No. words: 925; after pruning: 899


Histogram of relative pair offsets, for read pairs with multiple alignments:
54     2

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    1    0.0 8.4 (1,1:408)  388  0.00 0.00 0.00  BG607141Sn28P003C03P034A121F1_025.ab1        2   409 (49)  C BG607141Sn28P003C03P034A121R1_025.ab1   (59)   408     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 1       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  204 nodes

 104 str. conn. components

Path
    1  C BG607141Sn28P003C03P034A121R1_025.ab1   467 
  167    BG607141Sn28P003C03P034A121F1_025.ab1   109 
  187  C BG607141Sn28P003C03P034A121R1_025.ab1   281 
  239    BG607141Sn28P003C03P034A121F1_025.ab1   181 
  247  C BG607141Sn28P003C03P034A121R1_025.ab1   221 
  323    BG607141Sn28P003C03P034A121F1_025.ab1   265 
Contig length: old 516, new 516

Contig length: old 516, new 516
New start: 0