No. words: 1036; after pruning: 1010


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 10.7 (1,1:522)  468  0.79 0.00 0.00  BG607141Td10P059H09P003C091F1_078.ab1        1   508 (0)  C BG607141Td10P059H09P003C091R1_078.ab1   (5)   523    16 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  246 nodes

 125 str. conn. components

Path
    1  C BG607141Td10P059H09P003C091R1_078.ab1   528 
    9    BG607141Td10P059H09P003C091F1_078.ab1     4 
   25  C BG607141Td10P059H09P003C091R1_078.ab1   504 
   35    BG607141Td10P059H09P003C091F1_078.ab1    30 
   51  C BG607141Td10P059H09P003C091R1_078.ab1   478 
   55    BG607141Td10P059H09P003C091F1_078.ab1    50 
   63  C BG607141Td10P059H09P003C091R1_078.ab1   466 
   71    BG607141Td10P059H09P003C091F1_078.ab1    66 
   79  C BG607141Td10P059H09P003C091R1_078.ab1   450 
   91    BG607141Td10P059H09P003C091F1_078.ab1    86 
  123  C BG607141Td10P059H09P003C091R1_078.ab1   406 
  131    BG607141Td10P059H09P003C091F1_078.ab1   126 
  143  C BG607141Td10P059H09P003C091R1_078.ab1   386 
  151    BG607141Td10P059H09P003C091F1_078.ab1   146 
  155  C BG607141Td10P059H09P003C091R1_078.ab1   374 
  175    BG607141Td10P059H09P003C091F1_078.ab1   170 
  187  C BG607141Td10P059H09P003C091R1_078.ab1   342 
  223    BG607141Td10P059H09P003C091F1_078.ab1   218 
  227  C BG607141Td10P059H09P003C091R1_078.ab1   302 
  235    BG607141Td10P059H09P003C091F1_078.ab1   230 
  243  C BG607141Td10P059H09P003C091R1_078.ab1   286 
  251    BG607141Td10P059H09P003C091F1_078.ab1   246 
  255  C BG607141Td10P059H09P003C091R1_078.ab1   274 
  319    BG607141Td10P059H09P003C091F1_078.ab1   314 
  347  C BG607141Td10P059H09P003C091R1_078.ab1   182 
  387    BG607141Td10P059H09P003C091F1_078.ab1   382 
  395  C BG607141Td10P059H09P003C091R1_078.ab1   134 
  411    BG607141Td10P059H09P003C091F1_078.ab1   406 
  427  C BG607141Td10P059H09P003C091R1_078.ab1   102 
  439    BG607141Td10P059H09P003C091F1_078.ab1   434 
  449  C BG607141Td10P059H09P003C091R1_078.ab1    80 
  505    BG607141Td10P059H09P003C091F1_078.ab1   500 
  509  C BG607141Td10P059H09P003C091R1_078.ab1    20 
Contig length: old 528, new 528

Contig length: old 528, new 528
New start: 0