No. words: 1192; after pruning: 1166


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 8.6 (1,1:428)  405  0.93 0.47 0.00  BG607279Ld13P081G03P081G091F1_092.ab1        1   428 (151)  C BG607279Ld13P081G03P081G091R1_092.ab1   (183)   430     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  202 nodes

 103 str. conn. components

Path
    1  C BG607279Ld13P081G03P081G091R1_092.ab1   613 
  344    BG607279Ld13P081G03P081G091F1_092.ab1   159 
  352  C BG607279Ld13P081G03P081G091R1_092.ab1   262 
  384    BG607279Ld13P081G03P081G091F1_092.ab1   199 
  488  C BG607279Ld13P081G03P081G091R1_092.ab1   126 
  508    BG607279Ld13P081G03P081G091F1_092.ab1   323 
Contig length: old 763, new 764

Contig length: old 764, new 764
New start: 0