No. words: 1184; after pruning: 1158


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 9.3 (1,1:422)  416  0.00 0.24 0.00  BG607279Ld16P081G03P081G091F1_086.ab1        1   423 (154)  C BG607279Ld16P081G03P081G091R1_086.ab1   (183)   424     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  1       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  208 nodes

 106 str. conn. components

Path
    1  C BG607279Ld16P081G03P081G091R1_086.ab1   607 
  481    BG607279Ld16P081G03P081G091F1_086.ab1   297 
Contig length: old 761, new 761

Contig length: old 761, new 761
New start: 0