No. words: 1372; after pruning: 1346


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    3    0.0 9.0 (1,1:843)  458  1.82 0.00 0.00  BG607424Tu01P081A04P081A101F1_026.ab1        4   497 (1)  C BG607424Tu01P081A04P081A101R1_026.ab1   (33)   841   348 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 3       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  230 nodes

 117 str. conn. components

Path
    1  C BG607424Tu01P081A04P081A101R1_026.ab1   874 
   41    BG607424Tu01P081A04P081A101F1_026.ab1    11 
  221  C BG607424Tu01P081A04P081A101R1_026.ab1   654 
  229    BG607424Tu01P081A04P081A101F1_026.ab1   199 
  237  C BG607424Tu01P081A04P081A101R1_026.ab1   638 
  245    BG607424Tu01P081A04P081A101F1_026.ab1   215 
  261  C BG607424Tu01P081A04P081A101R1_026.ab1   614 
  301    BG607424Tu01P081A04P081A101F1_026.ab1   271 
  305  C BG607424Tu01P081A04P081A101R1_026.ab1   570 
Contig length: old 874, new 874

Contig length: old 874, new 874
New start: 0