No. words: 1299; after pruning: 1273


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 7.8 (1,1:483)  459  0.62 0.21 0.21  BG607570Ld03P081B04P081B101F1_051.ab1        1   484 (154)  C BG607570Ld03P081B04P081B101R1_051.ab1   (177)   484     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  232 nodes

 118 str. conn. components

Path
    1  C BG607570Ld03P081B04P081B101R1_051.ab1   661 
  492    BG607570Ld03P081B04P081B101F1_051.ab1   314 
Contig length: old 815, new 816

Contig length: old 816, new 816
New start: 0