No. words: 1306; after pruning: 1280


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 10.8 (1,1:488)  481  0.00 0.00 0.00  BG607570Ld05P081B04P081B101F1_080.ab1        1   489 (151)  C BG607570Ld05P081B04P081B101R1_080.ab1   (177)   489     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  246 nodes

 125 str. conn. components

Path
    1  C BG607570Ld05P081B04P081B101R1_080.ab1   666 
  273    BG607570Ld05P081B04P081B101F1_080.ab1    96 
  325  C BG607570Ld05P081B04P081B101R1_080.ab1   342 
  397    BG607570Ld05P081B04P081B101F1_080.ab1   220 
  453  C BG607570Ld05P081B04P081B101R1_080.ab1   214 
  501    BG607570Ld05P081B04P081B101F1_080.ab1   324 
Contig length: old 817, new 817

Contig length: old 817, new 817
New start: 0