No. words: 1321; after pruning: 1295


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 9.0 (1,1:504)  488  0.00 0.20 0.20  BG607570Ld07P081B04P081B101F1_076.ab1        1   505 (143)  C BG607570Ld07P081B04P081B101R1_076.ab1   (168)   505     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  248 nodes

 126 str. conn. components

Path
    1  C BG607570Ld07P081B04P081B101R1_076.ab1   673 
  302    BG607570Ld07P081B04P081B101F1_076.ab1   133 
Contig length: old 816, new 817

Contig length: old 817, new 817
New start: 0