No. words: 394; after pruning: 368


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    1    0.0 1.7 (1,1:232)   92  0.97 0.00 0.97  BJ251715Ta17P053G02P053H021F1_031.ab1        2   104 (0)  C BJ251715Ta17P053G02P053H021R1_031.ab1   (59)   231   130 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 1       1        0

Offset
  1       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  48 nodes

 26 str. conn. components

Path
    1  C BJ251715Ta17P053G02P053H021R1_031.ab1   290 
Contig length: old 290, new 290

Contig length: old 290, new 290
New start: 0