No. words: 1322; after pruning: 1296


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    2    0.0 9.6 (1,1:484)  452  0.83 0.00 0.00  BM134469Ld07P027D05P027D111F1_040.ab1        3   485 (189)  C BM134469Ld07P027D05P027D111R1_040.ab1   (165)   483     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 2       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  234 nodes

 119 str. conn. components

Path
    1  C BM134469Ld07P027D05P027D111R1_040.ab1   648 
  383    BM134469Ld07P027D05P027D111F1_040.ab1   220 
  403  C BM134469Ld07P027D05P027D111R1_040.ab1   246 
  439    BM134469Ld07P027D05P027D111F1_040.ab1   276 
  447  C BM134469Ld07P027D05P027D111R1_040.ab1   202 
  503    BM134469Ld07P027D05P027D111F1_040.ab1   340 
  515  C BM134469Ld07P027D05P027D111R1_040.ab1   134 
  519    BM134469Ld07P027D05P027D111F1_040.ab1   356 
  527  C BM134469Ld07P027D05P027D111R1_040.ab1   122 
  543    BM134469Ld07P027D05P027D111F1_040.ab1   380 
  547  C BM134469Ld07P027D05P027D111R1_040.ab1   102 
  555    BM134469Ld07P027D05P027D111F1_040.ab1   392 
  567  C BM134469Ld07P027D05P027D111R1_040.ab1    82 
  599    BM134469Ld07P027D05P027D111F1_040.ab1   436 
Contig length: old 837, new 837

Contig length: old 837, new 837
New start: 0