No. words: 1092; after pruning: 1066


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    2    0.0 7.7 (1,1:501)  470  0.00 0.40 0.20  BM134469Tu02P027D05P027D111F1_045.ab1        1   500 (58)  C BM134469Tu02P027D05P027D111R1_045.ab1   (31)   503     3 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 2       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  244 nodes

 124 str. conn. components

Path
    1  C BM134469Tu02P027D05P027D111R1_045.ab1   534 
  257    BM134469Tu02P027D05P027D111F1_045.ab1   224 
  365  C BM134469Tu02P027D05P027D111R1_045.ab1   170 
  385    BM134469Tu02P027D05P027D111F1_045.ab1   352 
  401  C BM134469Tu02P027D05P027D111R1_045.ab1   134 
  437    BM134469Tu02P027D05P027D111F1_045.ab1   404 
  445  C BM134469Tu02P027D05P027D111R1_045.ab1    90 
  489    BM134469Tu02P027D05P027D111F1_045.ab1   456 
Contig length: old 590, new 591

Contig length: old 591, new 591
New start: 0