No. words: 1000; after pruning: 974


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 7.4 (1,1:341)  332  0.29 0.00 0.00  BM134520Ld02P003A01P003A071F1_068.ab1        1   342 (173)  C BM134520Ld02P003A01P003A071R1_068.ab1   (143)   342     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  170 nodes

 87 str. conn. components

Path
    1  C BM134520Ld02P003A01P003A071R1_068.ab1   485 
  191    BM134520Ld02P003A01P003A071F1_068.ab1    48 
  195  C BM134520Ld02P003A01P003A071R1_068.ab1   291 
  283    BM134520Ld02P003A01P003A071F1_068.ab1   140 
  343  C BM134520Ld02P003A01P003A071R1_068.ab1   143 
  355    BM134520Ld02P003A01P003A071F1_068.ab1   212 
  367  C BM134520Ld02P003A01P003A071R1_068.ab1   119 
  387    BM134520Ld02P003A01P003A071F1_068.ab1   244 
Contig length: old 658, new 658

Contig length: old 658, new 658
New start: 0