No. words: 1008; after pruning: 982


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 7.8 (1,1:354)  345  0.00 0.28 0.00  BM134520Ln07P003A01A071F1_01.ab1        1   355 (147)  C BM134520Ln07P003A01A071R1_01.ab1   (150)   356     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  1       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  176 nodes

 90 str. conn. components

Path
    1  C BM134520Ln07P003A01A071R1_01.ab1   506 
  207    BM134520Ln07P003A01A071F1_01.ab1    56 
  215  C BM134520Ln07P003A01A071R1_01.ab1   292 
  223    BM134520Ln07P003A01A071F1_01.ab1    72 
  239  C BM134520Ln07P003A01A071R1_01.ab1   268 
  243    BM134520Ln07P003A01A071F1_01.ab1    92 
  295  C BM134520Ln07P003A01A071R1_01.ab1   212 
  307    BM134520Ln07P003A01A071F1_01.ab1   156 
  339  C BM134520Ln07P003A01A071R1_01.ab1   168 
  343    BM134520Ln07P003A01A071F1_01.ab1   192 
  375  C BM134520Ln07P003A01A071R1_01.ab1   132 
  379    BM134520Ln07P003A01A071F1_01.ab1   228 
  415  C BM134520Ln07P003A01A071R1_01.ab1    92 
  423    BM134520Ln07P003A01A071F1_01.ab1   272 
Contig length: old 653, new 653

Contig length: old 653, new 653
New start: 0