No. words: 1289; after pruning: 1263


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    3    0.0 8.5 (1,1:604)  589  0.00 0.00 0.17  BM134557Sn30P067F03P101G121F1_088.ab1        4   605 (42)  C BM134557Sn30P067F03P101G121R1_088.ab1   (41)   601     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 3       1        0

Offset
  1       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  298 nodes

 151 str. conn. components

Path
    1  C BM134557Sn30P067F03P101G121R1_088.ab1   642 
   61    BM134557Sn30P067F03P101G121F1_088.ab1    23 
   69  C BM134557Sn30P067F03P101G121R1_088.ab1   574 
  549    BM134557Sn30P067F03P101G121F1_088.ab1   511 
  553  C BM134557Sn30P067F03P101G121R1_088.ab1    90 
  609    BM134557Sn30P067F03P101G121F1_088.ab1   571 
  624  C BM134557Sn30P067F03P101G121R1_088.ab1    20 
  632    BM134557Sn30P067F03P101G121F1_088.ab1   594 
Contig length: old 684, new 685

Contig length: old 685, new 685
New start: 0