No. words: 1459; after pruning: 1420


Histogram of relative pair offsets, for read pairs with multiple alignments:
 0     2

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      3

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 12.6 (1,1:594)  576  0.67 0.00 0.00  BM134557Sn31P067F03P101G121F1_092.ab1        1   595 (40)  C BM134557Sn31P067F03P101G121R1_092.ab1   (52)   595     1 *
Merge:(0)    0    0.0 3.1 (2,1:4)  152  3.39 0.00 0.00  BM134557Sn31P067F03P101G121F1_092.ab1        5   181 (454)    BM134557Sn31P067F03P101G121F1_086.ab1        1   177 (0) *

Pass: 3
#reads  #contigs (not counting singlets)
    3      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       2        0

Gap   # merges  # failures
 size
 0       2        0

Offset
  0       3 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    3      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    3    1

Chimera merges: 


Contig 1:  444 nodes

 182 str. conn. components

Path
    1  C BM134557Sn31P067F03P101G121R1_092.ab1   647 
   64    BM134557Sn31P067F03P101G121F1_086.ab1     8 
   72  C BM134557Sn31P067F03P101G121R1_092.ab1   576 
   76    BM134557Sn31P067F03P101G121F1_092.ab1    24 
   80  C BM134557Sn31P067F03P101G121R1_092.ab1   568 
  111    BM134557Sn31P067F03P101G121F1_092.ab1    59 
  123  C BM134557Sn31P067F03P101G121R1_092.ab1   525 
  552    BM134557Sn31P067F03P101G121F1_092.ab1   500 
  556  C BM134557Sn31P067F03P101G121R1_092.ab1    92 
  600    BM134557Sn31P067F03P101G121F1_092.ab1   548 
  604  C BM134557Sn31P067F03P101G121R1_092.ab1    44 
  636    BM134557Sn31P067F03P101G121F1_092.ab1   584 
Contig length: old 687, new 687

Contig length: old 687, new 687
New start: 0