No. words: 1290; after pruning: 1264


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    1    0.0 12.8 (1,1:601)  584  0.00 0.17 0.17  BM134557Sn32P067F03P101G121F1_086.ab1        1   601 (44)  C BM134557Sn32P067F03P101G121R1_086.ab1   (44)   601     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 1       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  296 nodes

 150 str. conn. components

Path
    1  C BM134557Sn32P067F03P101G121R1_086.ab1   645 
   48    BM134557Sn32P067F03P101G121F1_086.ab1     4 
   72  C BM134557Sn32P067F03P101G121R1_086.ab1   574 
   80    BM134557Sn32P067F03P101G121F1_086.ab1    36 
   84  C BM134557Sn32P067F03P101G121R1_086.ab1   562 
   96    BM134557Sn32P067F03P101G121F1_086.ab1    52 
  100  C BM134557Sn32P067F03P101G121R1_086.ab1   546 
  108    BM134557Sn32P067F03P101G121F1_086.ab1    64 
  116  C BM134557Sn32P067F03P101G121R1_086.ab1   530 
  516    BM134557Sn32P067F03P101G121F1_086.ab1   472 
  520  C BM134557Sn32P067F03P101G121R1_086.ab1   126 
  552    BM134557Sn32P067F03P101G121F1_086.ab1   508 
  564  C BM134557Sn32P067F03P101G121R1_086.ab1    82 
  600    BM134557Sn32P067F03P101G121F1_086.ab1   556 
  604  C BM134557Sn32P067F03P101G121R1_086.ab1    42 
  620    BM134557Sn32P067F03P101G121F1_086.ab1   576 
  624  C BM134557Sn32P067F03P101G121R1_086.ab1    22 
  632    BM134557Sn32P067F03P101G121F1_086.ab1   588 
Contig length: old 688, new 689

Contig length: old 689, new 689
New start: 0