No. words: 1287; after pruning: 1261


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 13.3 (1,1:598)  591  0.00 0.00 0.00  BM134557Ta14P067F03P101G121F1_093.ab1        1   599 (45)  C BM134557Ta14P067F03P101G121R1_093.ab1   (44)   599     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  302 nodes

 153 str. conn. components

Path
    1  C BM134557Ta14P067F03P101G121R1_093.ab1   643 
   64    BM134557Ta14P067F03P101G121F1_093.ab1    20 
   68  C BM134557Ta14P067F03P101G121R1_093.ab1   576 
   76    BM134557Ta14P067F03P101G121F1_093.ab1    32 
   80  C BM134557Ta14P067F03P101G121R1_093.ab1   564 
   92    BM134557Ta14P067F03P101G121F1_093.ab1    48 
   96  C BM134557Ta14P067F03P101G121R1_093.ab1   548 
  116    BM134557Ta14P067F03P101G121F1_093.ab1    72 
  120  C BM134557Ta14P067F03P101G121R1_093.ab1   524 
  548    BM134557Ta14P067F03P101G121F1_093.ab1   504 
  564  C BM134557Ta14P067F03P101G121R1_093.ab1    80 
  576    BM134557Ta14P067F03P101G121F1_093.ab1   532 
  584  C BM134557Ta14P067F03P101G121R1_093.ab1    60 
  588    BM134557Ta14P067F03P101G121F1_093.ab1   544 
  592  C BM134557Ta14P067F03P101G121R1_093.ab1    52 
  620    BM134557Ta14P067F03P101G121F1_093.ab1   576 
  624  C BM134557Ta14P067F03P101G121R1_093.ab1    20 
  632    BM134557Ta14P067F03P101G121F1_093.ab1   588 
Contig length: old 688, new 688

Contig length: old 688, new 688
New start: 0