No. words: 1288; after pruning: 1262


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    1    0.0 13.0 (1,1:605)  593  0.00 0.00 0.17  BM134557Ta15P067F03P101G121F1_076.ab1        1   605 (27)  C BM134557Ta15P067F03P101G121R1_076.ab1   (51)   605     2 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 1       1        0

Offset
  1       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  300 nodes

 152 str. conn. components

Path
    1  C BM134557Ta15P067F03P101G121R1_076.ab1   656 
   67    BM134557Ta15P067F03P101G121F1_076.ab1    16 
   71  C BM134557Ta15P067F03P101G121R1_076.ab1   586 
   95    BM134557Ta15P067F03P101G121F1_076.ab1    44 
   99  C BM134557Ta15P067F03P101G121R1_076.ab1   558 
  551    BM134557Ta15P067F03P101G121F1_076.ab1   500 
  563  C BM134557Ta15P067F03P101G121R1_076.ab1    94 
  579    BM134557Ta15P067F03P101G121F1_076.ab1   528 
  583  C BM134557Ta15P067F03P101G121R1_076.ab1    74 
  619    BM134557Ta15P067F03P101G121F1_076.ab1   568 
  623  C BM134557Ta15P067F03P101G121R1_076.ab1    34 
  635    BM134557Ta15P067F03P101G121F1_076.ab1   584 
Contig length: old 682, new 683

Contig length: old 683, new 683
New start: 0