No. words: 1285; after pruning: 1259


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 13.2 (1,1:594)  587  0.00 0.00 0.00  BM134557Ta18P067F03P101G121F1_089.ab1        1   595 (44)  C BM134557Ta18P067F03P101G121R1_089.ab1   (51)   595     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  300 nodes

 152 str. conn. components

Path
    1  C BM134557Ta18P067F03P101G121R1_089.ab1   646 
  115    BM134557Ta18P067F03P101G121F1_089.ab1    64 
  119  C BM134557Ta18P067F03P101G121R1_089.ab1   528 
  551    BM134557Ta18P067F03P101G121F1_089.ab1   500 
  563  C BM134557Ta18P067F03P101G121R1_089.ab1    84 
  575    BM134557Ta18P067F03P101G121F1_089.ab1   524 
  579  C BM134557Ta18P067F03P101G121R1_089.ab1    68 
  619    BM134557Ta18P067F03P101G121F1_089.ab1   568 
  623  C BM134557Ta18P067F03P101G121R1_089.ab1    24 
  635    BM134557Ta18P067F03P101G121F1_089.ab1   584 
Contig length: old 690, new 690

Contig length: old 690, new 690
New start: 0