No. words: 1284; after pruning: 1258


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 12.8 (1,1:594)  579  0.50 0.00 0.00  BM134557Ta20P067F03P101G121F1_087.ab1        1   595 (44)  C BM134557Ta20P067F03P101G121R1_087.ab1   (50)   595     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  294 nodes

 149 str. conn. components

Path
    1  C BM134557Ta20P067F03P101G121R1_087.ab1   645 
  507    BM134557Ta20P067F03P101G121F1_087.ab1   457 
  511  C BM134557Ta20P067F03P101G121R1_087.ab1   135 
  535    BM134557Ta20P067F03P101G121F1_087.ab1   485 
  539  C BM134557Ta20P067F03P101G121R1_087.ab1   107 
  547    BM134557Ta20P067F03P101G121F1_087.ab1   497 
  555  C BM134557Ta20P067F03P101G121R1_087.ab1    91 
  559    BM134557Ta20P067F03P101G121F1_087.ab1   509 
  567  C BM134557Ta20P067F03P101G121R1_087.ab1    79 
  575    BM134557Ta20P067F03P101G121F1_087.ab1   525 
  587  C BM134557Ta20P067F03P101G121R1_087.ab1    59 
  615    BM134557Ta20P067F03P101G121F1_087.ab1   565 
  627  C BM134557Ta20P067F03P101G121R1_087.ab1    19 
  631    BM134557Ta20P067F03P101G121F1_087.ab1   581 
Contig length: old 689, new 689

Contig length: old 689, new 689
New start: 0