No. words: 1415; after pruning: 1376


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      3

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 13.2 (1,1:593)  586  0.00 0.00 0.00  BM134557Ta22P067F03P101G121F1_085.ab1        1   594 (40)  C BM134557Ta22P067F03P101G121R1_085.ab1   (49)   594     1 *
Merge:(0)    0    0.0 1.3 (2,1:44)  104  6.52 0.00 0.00  BM134557Ta22P067F03P101G121R1_085.ab1      413   550 (93)  C BM134557Ta22P067F03P101G121F1_088.ab1   (0)   138     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    3      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       2        0

Gap   # merges  # failures
 size
 0       2        0

Offset
  0       3 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    3      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    3    1

Chimera merges: 


Contig 1:  388 nodes

 170 str. conn. components

Path
    1  C BM134557Ta22P067F03P101G121R1_085.ab1   643 
   65    BM134557Ta22P067F03P101G121F1_085.ab1    16 
   69  C BM134557Ta22P067F03P101G121R1_085.ab1   575 
  549    BM134557Ta22P067F03P101G121F1_085.ab1   500 
  561  C BM134557Ta22P067F03P101G121R1_085.ab1    83 
  577    BM134557Ta22P067F03P101G121F1_085.ab1   528 
  581  C BM134557Ta22P067F03P101G121R1_085.ab1    63 
  617    BM134557Ta22P067F03P101G121F1_085.ab1   568 
  621  C BM134557Ta22P067F03P101G121R1_085.ab1    23 
  633    BM134557Ta22P067F03P101G121F1_085.ab1   584 
Contig length: old 683, new 683

Contig length: old 683, new 683
New start: 0