No. words: 973; after pruning: 947


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    2    0.0 6.0 (1,1:309)  295  0.32 0.00 0.00  BM137713Ld13P067H03P067H091F1_001.ab1        1   308 (159)  C BM137713Ld13P067H03P067H091R1_001.ab1   (196)   310     3 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 2       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  154 nodes

 79 str. conn. components

Path
    1  C BM137713Ld13P067H03P067H091R1_001.ab1   506 
  204    BM137713Ld13P067H03P067H091F1_001.ab1     8 
  224  C BM137713Ld13P067H03P067H091R1_001.ab1   283 
  233    BM137713Ld13P067H03P067H091F1_001.ab1    37 
  237  C BM137713Ld13P067H03P067H091R1_001.ab1   270 
  245    BM137713Ld13P067H03P067H091F1_001.ab1    49 
  345  C BM137713Ld13P067H03P067H091R1_001.ab1   162 
  349    BM137713Ld13P067H03P067H091F1_001.ab1   153 
Contig length: old 663, new 663

Contig length: old 663, new 663
New start: 0