No. words: 952; after pruning: 926


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    2    0.0 5.7 (1,1:309)  299  0.00 0.00 0.00  BM137713Ld14P067H03P067H091F1_016.ab1        1   308 (149)  C BM137713Ld14P067H03P067H091R1_016.ab1   (185)   310     3 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 2       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  156 nodes

 80 str. conn. components

Path
    1  C BM137713Ld14P067H03P067H091R1_016.ab1   495 
  393    BM137713Ld14P067H03P067H091F1_016.ab1   208 
  397  C BM137713Ld14P067H03P067H091R1_016.ab1    99 
  405    BM137713Ld14P067H03P067H091F1_016.ab1   220 
  413  C BM137713Ld14P067H03P067H091R1_016.ab1    83 
  421    BM137713Ld14P067H03P067H091F1_016.ab1   236 
  433  C BM137713Ld14P067H03P067H091R1_016.ab1    63 
  441    BM137713Ld14P067H03P067H091F1_016.ab1   256 
  461  C BM137713Ld14P067H03P067H091R1_016.ab1    35 
  465    BM137713Ld14P067H03P067H091F1_016.ab1   280 
Contig length: old 642, new 642

Contig length: old 642, new 642
New start: 0