No. words: 1598; after pruning: 1572


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 14.3 (1,1:954)  639  0.00 0.00 0.00  BM138163Ld07P027H05P027H111F1_084.ab1      164   806 (0)  C BM138163Ld07P027H05P027H111R1_084.ab1   (0)   792   150 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  324 nodes

 164 str. conn. components

Path
    1    BM138163Ld07P027H05P027H111F1_084.ab1     1 
  419  C BM138163Ld07P027H05P027H111R1_084.ab1   537 
  423    BM138163Ld07P027H05P027H111F1_084.ab1   423 
  439  C BM138163Ld07P027H05P027H111R1_084.ab1   517 
  447    BM138163Ld07P027H05P027H111F1_084.ab1   447 
  479  C BM138163Ld07P027H05P027H111R1_084.ab1   477 
  495    BM138163Ld07P027H05P027H111F1_084.ab1   495 
  507  C BM138163Ld07P027H05P027H111R1_084.ab1   449 
  539    BM138163Ld07P027H05P027H111F1_084.ab1   539 
  543  C BM138163Ld07P027H05P027H111R1_084.ab1   413 
  551    BM138163Ld07P027H05P027H111F1_084.ab1   551 
  555  C BM138163Ld07P027H05P027H111R1_084.ab1   401 
  563    BM138163Ld07P027H05P027H111F1_084.ab1   563 
  567  C BM138163Ld07P027H05P027H111R1_084.ab1   389 
  591    BM138163Ld07P027H05P027H111F1_084.ab1   591 
  595  C BM138163Ld07P027H05P027H111R1_084.ab1   361 
  603    BM138163Ld07P027H05P027H111F1_084.ab1   603 
  615  C BM138163Ld07P027H05P027H111R1_084.ab1   341 
Contig length: old 955, new 955

Contig length: old 955, new 955
New start: 0