No. words: 480; after pruning: 454


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    

Pass: 3
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 4
             Gap  Score    
Merge:(0)   11   -0.3 -0.3 (1,1:192)  161  0.55 1.10 0.55  BM138210Ta19P059D11P027A121F1_012.ab1        1   182 (62)  C BM138210Ta19P059D11P027A121R1_012.ab1   (42)   194    12 *

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
-0.3       1        0

Gap   # merges  # failures
 size
11       1        0

Offset
  0       1 

Read equivalence class histogram:
    1    2

Chimera merges: 


Contig 1:  84 nodes

 44 str. conn. components

Path
    1  C BM138210Ta19P059D11P027A121R1_012.ab1   236 
   94    BM138210Ta19P059D11P027A121F1_012.ab1    50 
   98  C BM138210Ta19P059D11P027A121R1_012.ab1   139 
  122    BM138210Ta19P059D11P027A121F1_012.ab1    78 
  134  C BM138210Ta19P059D11P027A121R1_012.ab1   103 
  150    BM138210Ta19P059D11P027A121F1_012.ab1   106 
Contig length: old 287, new 288

Contig length: old 288, new 288
New start: 0