No. words: 1421; after pruning: 1395


Histogram of relative pair offsets, for read pairs with multiple alignments:
52     2

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 10.3 (1,1:544)  520  0.00 0.18 0.18  BM140368Ld08P067G03P067G091F1_049.ab1        1   545 (180)  C BM140368Ld08P067G03P067G091R1_049.ab1   (151)   545     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  268 nodes

 136 str. conn. components

Path
    1  C BM140368Ld08P067G03P067G091R1_049.ab1   696 
  182    BM140368Ld08P067G03P067G091F1_049.ab1    30 
  186  C BM140368Ld08P067G03P067G091R1_049.ab1   511 
  410    BM140368Ld08P067G03P067G091F1_049.ab1   258 
  418  C BM140368Ld08P067G03P067G091R1_049.ab1   279 
  422    BM140368Ld08P067G03P067G091F1_049.ab1   270 
  438  C BM140368Ld08P067G03P067G091R1_049.ab1   259 
  462    BM140368Ld08P067G03P067G091F1_049.ab1   310 
  482  C BM140368Ld08P067G03P067G091R1_049.ab1   215 
  510    BM140368Ld08P067G03P067G091F1_049.ab1   358 
  654  C BM140368Ld08P067G03P067G091R1_049.ab1    43 
  658    BM140368Ld08P067G03P067G091F1_049.ab1   506 
Contig length: old 876, new 877

Contig length: old 877, new 877
New start: 0