No. words: 716; after pruning: 690


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 5.7 (1,1:256)  257  0.00 0.00 0.00  BM140477Ta25P059A12P027C121F1_030.ab1        1   257 (101)  C BM140477Ta25P059A12P027C121R1_030.ab1   (101)   257     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  130 nodes

 67 str. conn. components

Path
    1  C BM140477Ta25P059A12P027C121R1_030.ab1   358 
  165    BM140477Ta25P059A12P027C121F1_030.ab1    64 
  189  C BM140477Ta25P059A12P027C121R1_030.ab1   170 
  197    BM140477Ta25P059A12P027C121F1_030.ab1    96 
  205  C BM140477Ta25P059A12P027C121R1_030.ab1   154 
  213    BM140477Ta25P059A12P027C121F1_030.ab1   112 
Contig length: old 459, new 459

Contig length: old 459, new 459
New start: 0