No. words: 1595; after pruning: 1569


Histogram of relative pair offsets, for read pairs with multiple alignments:
99     6

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    

Pass: 3
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 4
             Gap  Score    
Rjct: (2)  118   -5.3 -5.3 (1,1:1442)   22  0.00 0.00 0.00  BQ160340At01P081F04P081F101F1_058.ab1      576   597 (118)  C BQ160340At01P081F04P081F101R1_058.ab1   (12)   868   847 *
  Worst pair: offset 0 
LLR breakdown: discreps: 0.0 (<20 part: 0.0 (#=0), >20:0.0 (#=0); in HQ: 0.0, out HQ 0.0), match: 0.5  trail: -4.8  lead: -1.0  total: -5.3   22  0.00 0.00 0.00  BQ160340At01P081F04P081F101F1_058.ab1      576   597 (118)  C BQ160340At01P081F04P081F101R1_058.ab1   (12)   868   847 *

Pass: 4
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
-5.3       0        1

Gap   # merges  # failures
 size
118       0        1

Offset
  0       1 

Read equivalence class histogram:
    1    2

Chimera merges: 

Merge:(0)  118    0.0 0.4 (1,1:1442)   22  0.00 0.00 0.00  BQ160340At01P081F04P081F101R1_058.ab1      847   868 (12)  C BQ160340At01P081F04P081F101F1_058.ab1   (118)   597   576 *

Contig 1:  12 nodes

 8 str. conn. components

Path
    1    BQ160340At01P081F04P081F101R1_058.ab1     1 
  853  C BQ160340At01P081F04P081F101F1_058.ab1   591 
Contig length: old 1443, new 1443

Contig length: old 1443, new 1443
New start: 0