No. words: 1001; after pruning: 975


Histogram of relative pair offsets, for read pairs with multiple alignments:
99     2

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    

Pass: 3
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 4
             Gap  Score    
Merge:(0)    8   -0.5 -0.5 (1,1:873)  110  2.52 0.00 0.00  BQ160340Ld01P081F04P081F101F1_058.ab1      573   691 (0)  C BQ160340Ld01P081F04P081F101R1_058.ab1   (8)   302   184 *

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
-0.5       1        0

Gap   # merges  # failures
 size
 8       1        0

Offset
  0       1 

Read equivalence class histogram:
    1    2

Chimera merges: 


Contig 1:  52 nodes

 28 str. conn. components

Path
    1    BQ160340Ld01P081F04P081F101F1_058.ab1     1 
  687  C BQ160340Ld01P081F04P081F101R1_058.ab1   188 
Contig length: old 874, new 874

Contig length: old 874, new 874
New start: 0