No. words: 990; after pruning: 964


Histogram of relative pair offsets, for read pairs with multiple alignments:
99     2

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 0.9 (1,1:865)  106  4.84 0.00 0.00  BQ160340Ld03P081F04P081F101F1_054.ab1      560   683 (0)  C BQ160340Ld03P081F04P081F101R1_054.ab1   (0)   307   184 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  48 nodes

 26 str. conn. components

Path
    1    BQ160340Ld03P081F04P081F101F1_054.ab1     1 
  649  C BQ160340Ld03P081F04P081F101R1_054.ab1   218 
  653    BQ160340Ld03P081F04P081F101F1_054.ab1   653 
  677  C BQ160340Ld03P081F04P081F101R1_054.ab1   190 
Contig length: old 866, new 866

Contig length: old 866, new 866
New start: 0