No. words: 1351; after pruning: 1325


Histogram of relative pair offsets, for read pairs with multiple alignments:
99     2

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 8.5 (1,1:857)  455  1.42 0.00 0.00  BQ160340Ld06P081F04P081F101F1_079.ab1      193   685 (0)  C BQ160340Ld06P081F04P081F101R1_079.ab1   (0)   666   174 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  230 nodes

 117 str. conn. components

Path
    1    BQ160340Ld06P081F04P081F101F1_079.ab1     1 
  586  C BQ160340Ld06P081F04P081F101R1_079.ab1   273 
  590    BQ160340Ld06P081F04P081F101F1_079.ab1   590 
  652  C BQ160340Ld06P081F04P081F101R1_079.ab1   207 
  664    BQ160340Ld06P081F04P081F101F1_079.ab1   664 
  668  C BQ160340Ld06P081F04P081F101R1_079.ab1   191 
Contig length: old 858, new 858

Contig length: old 858, new 858
New start: 0