No. words: 1762; after pruning: 1694


Histogram of relative pair offsets, for read pairs with multiple alignments:
32     2
60     2
66     4
92     2
95     2
98     2
99    96

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 14.0 (1,1:1111)  610  0.46 0.00 0.15  BQ160340Ld12P081F04P081F101F1_095.ab1      209   859 (0)  C BQ160340Ld12P081F04P081F101R1_095.ab1   (0)   903   254 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  1       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  314 nodes

 159 str. conn. components

Path
    1    BQ160340Ld12P081F04P081F101F1_095.ab1     1 
  540  C BQ160340Ld12P081F04P081F101R1_095.ab1   573 
  548    BQ160340Ld12P081F04P081F101F1_095.ab1   548 
  556  C BQ160340Ld12P081F04P081F101R1_095.ab1   557 
  560    BQ160340Ld12P081F04P081F101F1_095.ab1   560 
  588  C BQ160340Ld12P081F04P081F101R1_095.ab1   525 
Contig length: old 1112, new 1112

Contig length: old 1112, new 1112
New start: 0