No. words: 1808; after pruning: 1768


Histogram of relative pair offsets, for read pairs with multiple alignments:
32     2
66     4
95     2
98     2
99    80

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 15.4 (1,1:1105)  662  0.28 0.00 0.00  BQ160340Ld15P081F04P081F101F1_089.ab1      222   923 (0)  C BQ160340Ld15P081F04P081F101R1_089.ab1   (0)   885   184 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  348 nodes

 176 str. conn. components

Path
    1    BQ160340Ld15P081F04P081F101F1_089.ab1     1 
  509  C BQ160340Ld15P081F04P081F101R1_089.ab1   598 
  521    BQ160340Ld15P081F04P081F101F1_089.ab1   521 
  529  C BQ160340Ld15P081F04P081F101R1_089.ab1   578 
  541    BQ160340Ld15P081F04P081F101F1_089.ab1   541 
  545  C BQ160340Ld15P081F04P081F101R1_089.ab1   562 
  549    BQ160340Ld15P081F04P081F101F1_089.ab1   549 
  581  C BQ160340Ld15P081F04P081F101R1_089.ab1   526 
Contig length: old 1106, new 1106

Contig length: old 1106, new 1106
New start: 0