No. words: 1808; after pruning: 1754


Histogram of relative pair offsets, for read pairs with multiple alignments:
32     2
60     2
66     4
92     2
95     2
98     2
99    96

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 13.8 (1,1:1102)  653  0.28 0.28 0.14  BQ160340Ld17P081F04P081F101F1_085.ab1      213   917 (0)  C BQ160340Ld17P081F04P081F101R1_085.ab1   (0)   891   186 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  336 nodes

 170 str. conn. components

Path
    1    BQ160340Ld17P081F04P081F101F1_085.ab1     1 
  517  C BQ160340Ld17P081F04P081F101R1_085.ab1   587 
  541    BQ160340Ld17P081F04P081F101F1_085.ab1   541 
  545  C BQ160340Ld17P081F04P081F101R1_085.ab1   559 
Contig length: old 1103, new 1103

Contig length: old 1103, new 1103
New start: 0