No. words: 1387; after pruning: 1361


Histogram of relative pair offsets, for read pairs with multiple alignments:
99     2

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    

Pass: 3
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 4
             Gap  Score    
Merge:(0)    0   -0.7 -0.7 (1,1:879)  404  5.92 0.00 0.00  BQ160340Ld18P081F04P081F101F1_083.ab1      234   740 (0)  C BQ160340Ld18P081F04P081F101R1_083.ab1   (0)   647   141 *

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
-0.7       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Read equivalence class histogram:
    1    2

Chimera merges: 


Contig 1:  174 nodes

 89 str. conn. components

Path
    1    BQ160340Ld18P081F04P081F101F1_083.ab1     1 
  639  C BQ160340Ld18P081F04P081F101R1_083.ab1   242 
  671    BQ160340Ld18P081F04P081F101F1_083.ab1   671 
  675  C BQ160340Ld18P081F04P081F101R1_083.ab1   206 
Contig length: old 880, new 880

Contig length: old 880, new 880
New start: 0