No. words: 1598; after pruning: 1558


Histogram of relative pair offsets, for read pairs with multiple alignments:
29     2
60     2
69     4
89     2
92     2
98     2
99    96

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 9.4 (1,1:1108)  454  0.41 0.20 0.00  BQ160340Tu02P081F04P081F101F1_064.ab1      309   796 (0)  C BQ160340Tu02P081F04P081F101R1_064.ab1   (0)   802   314 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  1       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  236 nodes

 120 str. conn. components

Path
    1    BQ160340Tu02P081F04P081F101F1_064.ab1     1 
  563  C BQ160340Tu02P081F04P081F101R1_064.ab1   548 
Contig length: old 1109, new 1110

Contig length: old 1110, new 1110
New start: 0