No. words: 1442; after pruning: 1416


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 2.5 (1,1:1232)  182  3.35 0.00 0.00  BQ160970At01P081G04P081G101F1_077.ab1      370   578 (0)  C BQ160970At01P081G04P081G101R1_077.ab1   (0)   864   656 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  92 nodes

 48 str. conn. components

Path
    1    BQ160970At01P081G04P081G101F1_077.ab1     1 
  488  C BQ160970At01P081G04P081G101R1_077.ab1   746 
  499    BQ160970At01P081G04P081G101F1_077.ab1   499 
  527  C BQ160970At01P081G04P081G101R1_077.ab1   707 
Contig length: old 1233, new 1233

Contig length: old 1233, new 1233
New start: 0