No. words: 1616; after pruning: 1590


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 5.6 (1,1:1284)  315  0.00 0.00 0.30  BQ160970At02P081G04P081G101F1_075.ab1      465   795 (0)  C BQ160970At02P081G04P081G101R1_075.ab1   (0)   821   492 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  162 nodes

 83 str. conn. components

Path
    1    BQ160970At02P081G04P081G101F1_075.ab1     1 
  636  C BQ160970At02P081G04P081G101R1_075.ab1   650 
  648    BQ160970At02P081G04P081G101F1_075.ab1   648 
  652  C BQ160970At02P081G04P081G101R1_075.ab1   634 
Contig length: old 1285, new 1285

Contig length: old 1285, new 1285
New start: 0