No. words: 1275; after pruning: 1249


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 4.8 (1,1:1031)  230  1.23 0.00 0.00  BQ160970Tu02P081G04P081G101F1_052.ab1      303   545 (0)  C BQ160970Tu02P081G04P081G101R1_052.ab1   (0)   730   488 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  116 nodes

 60 str. conn. components

Path
    1    BQ160970Tu02P081G04P081G101F1_052.ab1     1 
  350  C BQ160970Tu02P081G04P081G101R1_052.ab1   683 
  354    BQ160970Tu02P081G04P081G101F1_052.ab1   354 
  374  C BQ160970Tu02P081G04P081G101R1_052.ab1   659 
  382    BQ160970Tu02P081G04P081G101F1_052.ab1   382 
  406  C BQ160970Tu02P081G04P081G101R1_052.ab1   627 
Contig length: old 1032, new 1032

Contig length: old 1032, new 1032
New start: 0