No. words: 1385; after pruning: 1345


Histogram of relative pair offsets, for read pairs with multiple alignments:
45     2
47     2
92     2

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 12.2 (1,1:645)  609  0.31 0.31 0.00  BQ167580At02P081B05P081B111F1_089.ab1        1   645 (57)  C BQ167580At02P081B05P081B111R1_089.ab1   (36)   647     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  314 nodes

 159 str. conn. components

Path
    1  C BQ167580At02P081B05P081B111R1_089.ab1   683 
   53    BQ167580At02P081B05P081B111F1_089.ab1    16 
  122  C BQ167580At02P081B05P081B111R1_089.ab1   561 
  126    BQ167580At02P081B05P081B111F1_089.ab1    89 
  142  C BQ167580At02P081B05P081B111R1_089.ab1   541 
  146    BQ167580At02P081B05P081B111F1_089.ab1   109 
  222  C BQ167580At02P081B05P081B111R1_089.ab1   461 
  226    BQ167580At02P081B05P081B111F1_089.ab1   189 
  238  C BQ167580At02P081B05P081B111R1_089.ab1   445 
  542    BQ167580At02P081B05P081B111F1_089.ab1   505 
  598  C BQ167580At02P081B05P081B111R1_089.ab1    85 
  602    BQ167580At02P081B05P081B111F1_089.ab1   565 
  610  C BQ167580At02P081B05P081B111R1_089.ab1    73 
  626    BQ167580At02P081B05P081B111F1_089.ab1   589 
  634  C BQ167580At02P081B05P081B111R1_089.ab1    49 
  650    BQ167580At02P081B05P081B111F1_089.ab1   613 
  658  C BQ167580At02P081B05P081B111R1_089.ab1    25 
  666    BQ167580At02P081B05P081B111F1_089.ab1   629 
  670  C BQ167580At02P081B05P081B111R1_089.ab1    13 
  678    BQ167580At02P081B05P081B111F1_089.ab1   641 
Contig length: old 739, new 739

Contig length: old 739, new 739
New start: 0