No. words: 1410; after pruning: 1384


Histogram of relative pair offsets, for read pairs with multiple alignments:
46     4
92     2

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 12.1 (1,1:546)  525  0.00 0.00 0.00  BQ167580Ld06P081B05P081B111F1_068.ab1        1   547 (151)  C BQ167580Ld06P081B05P081B111R1_068.ab1   (165)   547     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  276 nodes

 140 str. conn. components

Path
    1  C BQ167580Ld06P081B05P081B111R1_068.ab1   712 
  245    BQ167580Ld06P081B05P081B111F1_068.ab1    80 
  253  C BQ167580Ld06P081B05P081B111R1_068.ab1   460 
  281    BQ167580Ld06P081B05P081B111F1_068.ab1   116 
  325  C BQ167580Ld06P081B05P081B111R1_068.ab1   388 
  505    BQ167580Ld06P081B05P081B111F1_068.ab1   340 
Contig length: old 863, new 863

Contig length: old 863, new 863
New start: 0