No. words: 1400; after pruning: 1374


Histogram of relative pair offsets, for read pairs with multiple alignments:
46     4
92     2

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 11.5 (1,1:542)  516  0.00 0.18 0.00  BQ167580Ld10P081B05P081B111F1_051.ab1        2   543 (175)  C BQ167580Ld10P081B05P081B111R1_051.ab1   (139)   543     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  1       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  268 nodes

 136 str. conn. components

Path
    1  C BQ167580Ld10P081B05P081B111R1_051.ab1   682 
  332    BQ167580Ld10P081B05P081B111F1_051.ab1   193 
  552  C BQ167580Ld10P081B05P081B111R1_051.ab1   131 
  580    BQ167580Ld10P081B05P081B111F1_051.ab1   441 
Contig length: old 857, new 857

Contig length: old 857, new 857
New start: 0