No. words: 1361; after pruning: 1335


Histogram of relative pair offsets, for read pairs with multiple alignments:
46     4
92     2

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 11.0 (1,1:506)  478  0.20 0.20 0.00  BQ167580Ld11P081B05P081B111F1_064.ab1        1   507 (158)  C BQ167580Ld11P081B05P081B111R1_064.ab1   (188)   508     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  1       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  252 nodes

 128 str. conn. components

Path
    1  C BQ167580Ld11P081B05P081B111R1_064.ab1   696 
  297    BQ167580Ld11P081B05P081B111F1_064.ab1   108 
Contig length: old 854, new 854

Contig length: old 854, new 854
New start: 0