No. words: 1017; after pruning: 991


Histogram of relative pair offsets, for read pairs with multiple alignments:
46     4
92     2

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 9.6 (1,1:445)  416  0.45 0.00 0.00  BQ167580Sn27P115B08P081B111F1_021.ab1        1   446 (59)  C BQ167580Sn27P115B08P081B111R1_021.ab1   (66)   446     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  220 nodes

 112 str. conn. components

Path
    1  C BQ167580Sn27P115B08P081B111R1_021.ab1   512 
  366    BQ167580Sn27P115B08P081B111F1_021.ab1   300 
  406  C BQ167580Sn27P115B08P081B111R1_021.ab1   107 
  422    BQ167580Sn27P115B08P081B111F1_021.ab1   356 
Contig length: old 571, new 571

Contig length: old 571, new 571
New start: 0