No. words: 1194; after pruning: 1168


Histogram of relative pair offsets, for read pairs with multiple alignments:
45     2
47     2
92     2

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 11.8 (1,1:552)  520  0.00 0.36 0.00  BQ167580Ta12P115F08P081B111F1_079.ab1        1   552 (46)  C BQ167580Ta12P115F08P081B111R1_079.ab1   (42)   554     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  270 nodes

 137 str. conn. components

Path
    1  C BQ167580Ta12P115F08P081B111R1_079.ab1   596 
  138    BQ167580Ta12P115F08P081B111F1_079.ab1    94 
  142  C BQ167580Ta12P115F08P081B111R1_079.ab1   455 
  158    BQ167580Ta12P115F08P081B111F1_079.ab1   114 
  282  C BQ167580Ta12P115F08P081B111R1_079.ab1   315 
  450    BQ167580Ta12P115F08P081B111F1_079.ab1   406 
  486  C BQ167580Ta12P115F08P081B111R1_079.ab1   111 
  522    BQ167580Ta12P115F08P081B111F1_079.ab1   478 
Contig length: old 641, new 642

Contig length: old 642, new 642
New start: 0