No. words: 1035; after pruning: 1009


Histogram of relative pair offsets, for read pairs with multiple alignments:
46     2
47     2
93     2

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    3    0.0 10.0 (1,1:461)  436  0.00 0.00 0.00  BQ167580Ta15P115B08P081B111F1_001.ab1        1   459 (54)  C BQ167580Ta15P115B08P081B111R1_001.ab1   (60)   462     4 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 3       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  232 nodes

 118 str. conn. components

Path
    1  C BQ167580Ta15P115B08P081B111R1_001.ab1   522 
  320    BQ167580Ta15P115B08P081B111F1_001.ab1   260 
  324  C BQ167580Ta15P115B08P081B111R1_001.ab1   199 
  348    BQ167580Ta15P115B08P081B111F1_001.ab1   288 
  428  C BQ167580Ta15P115B08P081B111R1_001.ab1    95 
  436    BQ167580Ta15P115B08P081B111F1_001.ab1   376 
Contig length: old 573, new 573

Contig length: old 573, new 573
New start: 0