No. words: 1035; after pruning: 1009


Histogram of relative pair offsets, for read pairs with multiple alignments:
46     2
47     2
93     2

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 10.3 (1,1:468)  442  0.00 0.21 0.00  BQ167580Ta17P115B08P081B111F1_031.ab1        1   469 (50)  C BQ167580Ta17P115B08P081B111R1_031.ab1   (46)   470     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  1       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  234 nodes

 119 str. conn. components

Path
    1  C BQ167580Ta17P115B08P081B111R1_031.ab1   516 
  104    BQ167580Ta17P115B08P081B111F1_031.ab1    57 
  108  C BQ167580Ta17P115B08P081B111R1_031.ab1   409 
  120    BQ167580Ta17P115B08P081B111F1_031.ab1    73 
  124  C BQ167580Ta17P115B08P081B111R1_031.ab1   393 
  156    BQ167580Ta17P115B08P081B111F1_031.ab1   109 
  172  C BQ167580Ta17P115B08P081B111R1_031.ab1   345 
  196    BQ167580Ta17P115B08P081B111F1_031.ab1   149 
  288  C BQ167580Ta17P115B08P081B111R1_031.ab1   229 
  304    BQ167580Ta17P115B08P081B111F1_031.ab1   257 
Contig length: old 566, new 566

Contig length: old 566, new 566
New start: 0