No. words: 960; after pruning: 934


Histogram of relative pair offsets, for read pairs with multiple alignments:
46     4
92     2

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 9.1 (1,1:421)  392  0.24 0.24 0.00  BQ167580Ta20P115H07P081B111F1_030.ab1        1   422 (59)  C BQ167580Ta20P115H07P081B111R1_030.ab1   (56)   423     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  1       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  204 nodes

 104 str. conn. components

Path
    1  C BQ167580Ta20P115H07P081B111R1_030.ab1   479 
  281    BQ167580Ta20P115H07P081B111F1_030.ab1   224 
  289  C BQ167580Ta20P115H07P081B111R1_030.ab1   191 
  301    BQ167580Ta20P115H07P081B111F1_030.ab1   244 
  305  C BQ167580Ta20P115H07P081B111R1_030.ab1   175 
  309    BQ167580Ta20P115H07P081B111F1_030.ab1   252 
Contig length: old 538, new 538

Contig length: old 538, new 538
New start: 0