No. words: 1028; after pruning: 1002


Histogram of relative pair offsets, for read pairs with multiple alignments:
46     2
47     2
93     2

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    1    0.0 9.8 (1,1:465)  442  0.00 0.00 0.00  BQ167580Td02P115B08P081B111F1_016.ab1        1   465 (47)  C BQ167580Td02P115B08P081B111R1_016.ab1   (50)   466     2 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 1       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  234 nodes

 119 str. conn. components

Path
    1  C BQ167580Td02P115B08P081B111R1_016.ab1   516 
  162    BQ167580Td02P115B08P081B111F1_016.ab1   112 
  186  C BQ167580Td02P115B08P081B111R1_016.ab1   331 
  198    BQ167580Td02P115B08P081B111F1_016.ab1   148 
  330  C BQ167580Td02P115B08P081B111R1_016.ab1   187 
  338    BQ167580Td02P115B08P081B111F1_016.ab1   288 
  414  C BQ167580Td02P115B08P081B111R1_016.ab1   103 
  422    BQ167580Td02P115B08P081B111F1_016.ab1   372 
  470  C BQ167580Td02P115B08P081B111R1_016.ab1    47 
  474    BQ167580Td02P115B08P081B111F1_016.ab1   424 
Contig length: old 562, new 562

Contig length: old 562, new 562
New start: 0