No. words: 1034; after pruning: 1008


Histogram of relative pair offsets, for read pairs with multiple alignments:
46     2
47     2
93     2

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    2    0.0 9.4 (1,1:462)  438  0.00 0.00 0.00  BQ167580Td03P115B08P081B111F1_013.ab1        1   461 (46)  C BQ167580Td03P115B08P081B111R1_013.ab1   (64)   463     3 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 2       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  232 nodes

 118 str. conn. components

Path
    1  C BQ167580Td03P115B08P081B111R1_013.ab1   527 
  204    BQ167580Td03P115B08P081B111F1_013.ab1   140 
  212  C BQ167580Td03P115B08P081B111R1_013.ab1   316 
  248    BQ167580Td03P115B08P081B111F1_013.ab1   184 
  252  C BQ167580Td03P115B08P081B111R1_013.ab1   276 
  316    BQ167580Td03P115B08P081B111F1_013.ab1   252 
  332  C BQ167580Td03P115B08P081B111R1_013.ab1   196 
  348    BQ167580Td03P115B08P081B111F1_013.ab1   284 
  356  C BQ167580Td03P115B08P081B111R1_013.ab1   172 
  368    BQ167580Td03P115B08P081B111F1_013.ab1   304 
  416  C BQ167580Td03P115B08P081B111R1_013.ab1   112 
  424    BQ167580Td03P115B08P081B111F1_013.ab1   360 
  468  C BQ167580Td03P115B08P081B111R1_013.ab1    60 
  472    BQ167580Td03P115B08P081B111F1_013.ab1   408 
Contig length: old 571, new 571

Contig length: old 571, new 571
New start: 0